Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
KRT4P19013 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.51■□□□□ 0.07
KRT4P19013 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.51■□□□□ 0.07
KRT4P19013 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT4P19013 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT4P19013 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT4P19013 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
KRT4P19013 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
KRT4P19013 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 ADH5P3-201ENST00000433842 1137 ntBASIC15.5■□□□□ 0.07
KRT4P19013 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 RPL13AP23-201ENST00000480739 586 ntBASIC15.5■□□□□ 0.07
KRT4P19013 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
KRT4P19013 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.5■□□□□ 0.07
KRT4P19013 IGHV3-62-201ENST00000520057 340 ntBASIC15.5■□□□□ 0.07
KRT4P19013 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
KRT4P19013 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.5■□□□□ 0.07
KRT4P19013 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
KRT4P19013 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
KRT4P19013 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT4P19013 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT4P19013 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT4P19013 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
KRT4P19013 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT4P19013 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT4P19013 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
KRT4P19013 AC018442.1-201ENST00000421439 2061 ntBASIC15.5■□□□□ 0.07
KRT4P19013 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT4P19013 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT4P19013 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT4P19013 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT4P19013 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT4P19013 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT4P19013 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT4P19013 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT4P19013 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT4P19013 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT4P19013 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT4P19013 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT4P19013 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.49■□□□□ 0.07
KRT4P19013 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT4P19013 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.49■□□□□ 0.07
KRT4P19013 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT4P19013 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
KRT4P19013 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT4P19013 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT4P19013 SPDYE11-202ENST00000450699 704 ntBASIC15.49■□□□□ 0.07
KRT4P19013 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT4P19013 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.49■□□□□ 0.07
KRT4P19013 AC079140.1-201ENST00000508039 487 ntBASIC15.49■□□□□ 0.07
KRT4P19013 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT4P19013 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
KRT4P19013 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.49■□□□□ 0.07
KRT4P19013 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT4P19013 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.49■□□□□ 0.07
KRT4P19013 KRT8P23-201ENST00000560090 1207 ntBASIC15.49■□□□□ 0.07
KRT4P19013 SPDYE9P-201ENST00000570642 692 ntBASIC15.49■□□□□ 0.07
KRT4P19013 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.49■□□□□ 0.07
KRT4P19013 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT4P19013 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.49■□□□□ 0.07
KRT4P19013 SPDYE10P-202ENST00000612005 668 ntBASIC15.49■□□□□ 0.07
KRT4P19013 SPDYE8P-202ENST00000612377 668 ntBASIC15.49■□□□□ 0.07
KRT4P19013 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.49■□□□□ 0.07
KRT4P19013 AC092902.6-201ENST00000641783 218 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms