Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.84■□□□□ 0.13
ERCC2P18074 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.84■□□□□ 0.13
ERCC2P18074 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.84■□□□□ 0.13
ERCC2P18074 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
ERCC2P18074 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ERCC2P18074 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
ERCC2P18074 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
ERCC2P18074 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.83■□□□□ 0.13
ERCC2P18074 REXO1L2P-201ENST00000425429 2069 ntBASIC15.83■□□□□ 0.13
ERCC2P18074 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
ERCC2P18074 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ERCC2P18074 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ERCC2P18074 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ERCC2P18074 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
ERCC2P18074 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.83■□□□□ 0.13
ERCC2P18074 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
ERCC2P18074 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.83■□□□□ 0.12
ERCC2P18074 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
ERCC2P18074 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.83■□□□□ 0.12
ERCC2P18074 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.83■□□□□ 0.12
ERCC2P18074 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.83■□□□□ 0.12
ERCC2P18074 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.83■□□□□ 0.12
ERCC2P18074 AC140912.1-201ENST00000577171 1054 ntBASIC15.83■□□□□ 0.12
ERCC2P18074 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.83■□□□□ 0.12
ERCC2P18074 CTBP2P3-201ENST00000585629 1255 ntBASIC15.83■□□□□ 0.12
ERCC2P18074 AC093813.1-201ENST00000605066 256 ntBASIC15.83■□□□□ 0.12
ERCC2P18074 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.83■□□□□ 0.12
ERCC2P18074 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.83■□□□□ 0.12
ERCC2P18074 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ERCC2P18074 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.83■□□□□ 0.12
ERCC2P18074 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
ERCC2P18074 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.83■□□□□ 0.12
ERCC2P18074 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
ERCC2P18074 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ERCC2P18074 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.83■□□□□ 0.12
ERCC2P18074 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ERCC2P18074 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.82■□□□□ 0.12
ERCC2P18074 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.82■□□□□ 0.12
ERCC2P18074 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ERCC2P18074 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
ERCC2P18074 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.82■□□□□ 0.12
ERCC2P18074 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ERCC2P18074 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ERCC2P18074 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ERCC2P18074 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.82■□□□□ 0.12
ERCC2P18074 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ERCC2P18074 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ERCC2P18074 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.82■□□□□ 0.12
ERCC2P18074 C1QBPP1-201ENST00000400117 770 ntBASIC15.82■□□□□ 0.12
ERCC2P18074 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.82■□□□□ 0.12
ERCC2P18074 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.82■□□□□ 0.12
ERCC2P18074 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.82■□□□□ 0.12
ERCC2P18074 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.82■□□□□ 0.12
ERCC2P18074 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.82■□□□□ 0.12
ERCC2P18074 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.82■□□□□ 0.12
ERCC2P18074 WASH4P-201ENST00000564273 1246 ntBASIC15.82■□□□□ 0.12
ERCC2P18074 TP53TG3HP-202ENST00000569755 579 ntBASIC15.82■□□□□ 0.12
ERCC2P18074 AC124283.3-201ENST00000570869 594 ntBASIC15.82■□□□□ 0.12
ERCC2P18074 AC138761.1-201ENST00000584393 385 ntBASIC15.82■□□□□ 0.12
ERCC2P18074 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 AC103702.1-201ENST00000548801 2630 ntBASIC15.82■□□□□ 0.12
ERCC2P18074 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 AC093525.8-201ENST00000624099 1342 ntBASIC15.82■□□□□ 0.12
ERCC2P18074 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ERCC2P18074 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.82■□□□□ 0.12
ERCC2P18074 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.82■□□□□ 0.12
ERCC2P18074 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.82■□□□□ 0.12
ERCC2P18074 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ERCC2P18074 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms