Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.38□□□□□ -0.43
IGHV4-38-2P0DP08 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
IGHV4-38-2P0DP08 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IGHV4-38-2P0DP08 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IGHV4-38-2P0DP08 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
IGHV4-38-2P0DP08 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IGHV4-38-2P0DP08 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IGHV4-38-2P0DP08 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
IGHV4-38-2P0DP08 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
IGHV4-38-2P0DP08 AL365203.3-201ENST00000609742 2057 ntBASIC12.38□□□□□ -0.43
IGHV4-38-2P0DP08 REXO1L5P-201ENST00000622260 2098 ntBASIC12.38□□□□□ -0.43
IGHV4-38-2P0DP08 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 AL133338.1-201ENST00000565695 1517 ntBASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 BTBD6P1-201ENST00000412176 1267 ntBASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 MTX1P1-201ENST00000440904 838 ntBASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 AC104306.2-201ENST00000451877 341 ntBASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 AC022616.1-201ENST00000518688 554 ntBASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 EEF1DP1-201ENST00000585891 896 ntBASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 AC090616.6-203ENST00000579186 1945 ntBASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IGHV4-38-2P0DP08 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IGHV4-38-2P0DP08 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
IGHV4-38-2P0DP08 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IGHV4-38-2P0DP08 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IGHV4-38-2P0DP08 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.36□□□□□ -0.43
IGHV4-38-2P0DP08 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
IGHV4-38-2P0DP08 AC055811.4-201ENST00000624039 1754 ntBASIC12.36□□□□□ -0.43
IGHV4-38-2P0DP08 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.36□□□□□ -0.43
IGHV4-38-2P0DP08 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
IGHV4-38-2P0DP08 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IGHV4-38-2P0DP08 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms