Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM228BP0C875 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.42■□□□□ 0.22
FAM228BP0C875 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM228BP0C875 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.42■□□□□ 0.22
FAM228BP0C875 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
FAM228BP0C875 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.42■□□□□ 0.22
FAM228BP0C875 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.42■□□□□ 0.22
FAM228BP0C875 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.42■□□□□ 0.22
FAM228BP0C875 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.42■□□□□ 0.22
FAM228BP0C875 AC004967.1-201ENST00000453589 447 ntBASIC16.42■□□□□ 0.22
FAM228BP0C875 SDHAP3-202ENST00000515467 728 ntBASIC16.42■□□□□ 0.22
FAM228BP0C875 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
FAM228BP0C875 AC044860.1-202ENST00000559481 777 ntBASIC16.42■□□□□ 0.22
FAM228BP0C875 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.42■□□□□ 0.22
FAM228BP0C875 AC073592.8-201ENST00000624126 511 ntBASIC16.42■□□□□ 0.22
FAM228BP0C875 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FAM228BP0C875 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FAM228BP0C875 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM228BP0C875 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM228BP0C875 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM228BP0C875 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM228BP0C875 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
FAM228BP0C875 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
FAM228BP0C875 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM228BP0C875 TUBB3P1-201ENST00000405796 1332 ntBASIC16.42■□□□□ 0.22
FAM228BP0C875 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
FAM228BP0C875 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FAM228BP0C875 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
FAM228BP0C875 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.41■□□□□ 0.22
FAM228BP0C875 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
FAM228BP0C875 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
FAM228BP0C875 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 TSEN15P1-201ENST00000423257 515 ntBASIC16.41■□□□□ 0.22
FAM228BP0C875 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.41■□□□□ 0.22
FAM228BP0C875 DNAJB3-202ENST00000449667 1266 ntBASIC16.41■□□□□ 0.22
FAM228BP0C875 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.41■□□□□ 0.22
FAM228BP0C875 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.41■□□□□ 0.22
FAM228BP0C875 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.41■□□□□ 0.22
FAM228BP0C875 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
FAM228BP0C875 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
FAM228BP0C875 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 AC000095.1-201ENST00000603208 874 ntBASIC16.41■□□□□ 0.22
FAM228BP0C875 AL844908.2-201ENST00000609461 460 ntBASIC16.41■□□□□ 0.22
FAM228BP0C875 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.41■□□□□ 0.22
FAM228BP0C875 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
FAM228BP0C875 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.41■□□□□ 0.22
FAM228BP0C875 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
FAM228BP0C875 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
FAM228BP0C875 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM228BP0C875 BX640514.1-201ENST00000583223 1918 ntBASIC16.41■□□□□ 0.22
FAM228BP0C875 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM228BP0C875 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.41■□□□□ 0.22
FAM228BP0C875 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.4■□□□□ 0.22
FAM228BP0C875 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.4■□□□□ 0.22
FAM228BP0C875 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 AC015656.1-201ENST00000624209 3578 ntBASIC16.4■□□□□ 0.22
FAM228BP0C875 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FAM228BP0C875 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.4■□□□□ 0.22
FAM228BP0C875 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 AC007787.1-201ENST00000588095 1583 ntBASIC16.4■□□□□ 0.22
FAM228BP0C875 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.4■□□□□ 0.22
FAM228BP0C875 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FAM228BP0C875 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.4■□□□□ 0.22
FAM228BP0C875 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms