Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CXCL1P09341 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.01□□□□□ -0.49
CXCL1P09341 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.01□□□□□ -0.49
CXCL1P09341 AC132008.2-207ENST00000454517 770 ntBASIC12.01□□□□□ -0.49
CXCL1P09341 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.01□□□□□ -0.49
CXCL1P09341 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.01□□□□□ -0.49
CXCL1P09341 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.01□□□□□ -0.49
CXCL1P09341 RN7SL850P-201ENST00000579959 291 ntBASIC12.01□□□□□ -0.49
CXCL1P09341 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.01□□□□□ -0.49
CXCL1P09341 AC006557.2-201ENST00000592985 1240 ntBASIC12.01□□□□□ -0.49
CXCL1P09341 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
CXCL1P09341 AC066615.1-201ENST00000640911 628 ntBASIC12.01□□□□□ -0.49
CXCL1P09341 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.01□□□□□ -0.49
CXCL1P09341 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.01□□□□□ -0.49
CXCL1P09341 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 WASH3P-207ENST00000560956 1394 ntBASIC12.01□□□□□ -0.49
CXCL1P09341 FO538757.1-201ENST00000623083 1397 ntBASIC12.01□□□□□ -0.49
CXCL1P09341 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.01□□□□□ -0.49
CXCL1P09341 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.01□□□□□ -0.49
CXCL1P09341 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CXCL1P09341 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CXCL1P09341 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CXCL1P09341 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.01□□□□□ -0.49
CXCL1P09341 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.01□□□□□ -0.49
CXCL1P09341 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12□□□□□ -0.49
CXCL1P09341 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CXCL1P09341 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12□□□□□ -0.49
CXCL1P09341 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12□□□□□ -0.49
CXCL1P09341 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12□□□□□ -0.49
CXCL1P09341 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12□□□□□ -0.49
CXCL1P09341 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12□□□□□ -0.49
CXCL1P09341 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12□□□□□ -0.49
CXCL1P09341 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
CXCL1P09341 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12□□□□□ -0.49
CXCL1P09341 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12□□□□□ -0.49
CXCL1P09341 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12□□□□□ -0.49
CXCL1P09341 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12□□□□□ -0.49
CXCL1P09341 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12□□□□□ -0.49
CXCL1P09341 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12□□□□□ -0.49
CXCL1P09341 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CXCL1P09341 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.99□□□□□ -0.49
CXCL1P09341 AC068760.1-201ENST00000493579 1953 ntBASIC11.99□□□□□ -0.49
CXCL1P09341 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CXCL1P09341 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL1P09341 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CXCL1P09341 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL1P09341 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
CXCL1P09341 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.99□□□□□ -0.49
CXCL1P09341 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
CXCL1P09341 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL1P09341 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL1P09341 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CXCL1P09341 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms