Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPN1P07384 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 AC023024.2-201ENST00000623561 1993 ntBASIC15.24■□□□□ 0.03
CAPN1P07384 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CAPN1P07384 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.23■□□□□ 0.03
CAPN1P07384 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPN1P07384 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPN1P07384 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPN1P07384 AGAP7P-201ENST00000582299 2062 ntBASIC15.23■□□□□ 0.03
CAPN1P07384 AGAP14-201ENST00000624701 2060 ntBASIC15.23■□□□□ 0.03
CAPN1P07384 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CAPN1P07384 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPN1P07384 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CAPN1P07384 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
CAPN1P07384 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CAPN1P07384 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
CAPN1P07384 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CAPN1P07384 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CAPN1P07384 API5-211ENST00000534695 560 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPN1P07384 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPN1P07384 AC027307.3-201ENST00000594262 1100 ntBASIC15.23■□□□□ 0.03
CAPN1P07384 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPN1P07384 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPN1P07384 AL033527.5-202ENST00000641632 1098 ntBASIC15.23■□□□□ 0.03
CAPN1P07384 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPN1P07384 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPN1P07384 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPN1P07384 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPN1P07384 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPN1P07384 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPN1P07384 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPN1P07384 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPN1P07384 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.22■□□□□ 0.03
CAPN1P07384 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CAPN1P07384 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN1P07384 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CAPN1P07384 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN1P07384 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN1P07384 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 FO393414.2-201ENST00000405153 598 ntBASIC15.22■□□□□ 0.03
CAPN1P07384 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN1P07384 HIST3H2BA-201ENST00000436555 524 ntBASIC15.22■□□□□ 0.03
CAPN1P07384 AC114501.2-201ENST00000439631 535 ntBASIC15.22■□□□□ 0.03
CAPN1P07384 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN1P07384 GNAQP1-201ENST00000444815 1067 ntBASIC15.22■□□□□ 0.03
CAPN1P07384 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.22■□□□□ 0.03
CAPN1P07384 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 SPDYE18-201ENST00000510091 1050 ntBASIC15.22■□□□□ 0.03
CAPN1P07384 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.22■□□□□ 0.03
CAPN1P07384 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CAPN1P07384 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN1P07384 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.22■□□□□ 0.03
CAPN1P07384 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.22■□□□□ 0.03
CAPN1P07384 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN1P07384 AL132655.2-201ENST00000596276 594 ntBASIC15.22■□□□□ 0.03
CAPN1P07384 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN1P07384 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CAPN1P07384 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN1P07384 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms