Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC19.74■□□□□ 0.75
COL5A2P05997 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC19.74■□□□□ 0.75
COL5A2P05997 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC19.74■□□□□ 0.75
COL5A2P05997 LINC01783-202ENST00000614408 828 ntBASIC19.74■□□□□ 0.75
COL5A2P05997 MIR6769A-201ENST00000617340 73 ntBASIC19.74■□□□□ 0.75
COL5A2P05997 AC105137.3-201ENST00000617588 984 ntBASIC19.74■□□□□ 0.75
COL5A2P05997 BX284668.2-205ENST00000619677 828 ntBASIC19.74■□□□□ 0.75
COL5A2P05997 AL161773.1-201ENST00000624845 863 ntBASIC19.74■□□□□ 0.75
COL5A2P05997 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL5A2P05997 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL5A2P05997 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL5A2P05997 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COL5A2P05997 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.74■□□□□ 0.75
COL5A2P05997 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL5A2P05997 CICP13-201ENST00000422015 2789 ntBASIC19.74■□□□□ 0.75
COL5A2P05997 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL5A2P05997 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL5A2P05997 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL5A2P05997 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL5A2P05997 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL5A2P05997 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL5A2P05997 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.74■□□□□ 0.75
COL5A2P05997 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.74■□□□□ 0.75
COL5A2P05997 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COL5A2P05997 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.73■□□□□ 0.75
COL5A2P05997 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC19.73■□□□□ 0.75
COL5A2P05997 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 XBP1P1-201ENST00000436573 652 ntBASIC19.73■□□□□ 0.75
COL5A2P05997 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 AC018463.1-201ENST00000456674 917 ntBASIC19.73■□□□□ 0.75
COL5A2P05997 GCOM2-201ENST00000509133 1104 ntBASIC19.73■□□□□ 0.75
COL5A2P05997 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC19.73■□□□□ 0.75
COL5A2P05997 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COL5A2P05997 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
COL5A2P05997 MIR3188-201ENST00000583494 85 ntBASIC19.73■□□□□ 0.75
COL5A2P05997 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
COL5A2P05997 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COL5A2P05997 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
COL5A2P05997 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COL5A2P05997 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COL5A2P05997 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.73■□□□□ 0.75
COL5A2P05997 AC105250.1-201ENST00000509378 2057 ntBASIC19.73■□□□□ 0.75
COL5A2P05997 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COL5A2P05997 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 MBP-201ENST00000354542 575 ntTSL 2 BASIC19.73■□□□□ 0.75
COL5A2P05997 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COL5A2P05997 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.73■□□□□ 0.75
COL5A2P05997 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 AL627422.1-201ENST00000434104 580 ntBASIC19.73■□□□□ 0.75
COL5A2P05997 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC19.73■□□□□ 0.75
COL5A2P05997 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC19.73■□□□□ 0.75
COL5A2P05997 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL5A2P05997 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC19.73■□□□□ 0.75
COL5A2P05997 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC19.73■□□□□ 0.75
COL5A2P05997 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC19.73■□□□□ 0.75
COL5A2P05997 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC19.73■□□□□ 0.75
COL5A2P05997 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC19.73■□□□□ 0.75
COL5A2P05997 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.72■□□□□ 0.75
COL5A2P05997 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.72■□□□□ 0.75
COL5A2P05997 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
COL5A2P05997 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.72■□□□□ 0.75
COL5A2P05997 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
COL5A2P05997 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COL5A2P05997 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.72■□□□□ 0.75
COL5A2P05997 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.72■□□□□ 0.75
COL5A2P05997 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL5A2P05997 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 AC234644.1-201ENST00000406065 370 ntBASIC19.72■□□□□ 0.75
COL5A2P05997 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 DUTP3-201ENST00000450025 415 ntBASIC19.72■□□□□ 0.75
COL5A2P05997 MRPL22P1-201ENST00000505398 616 ntBASIC19.72■□□□□ 0.75
COL5A2P05997 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC19.72■□□□□ 0.75
COL5A2P05997 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC19.72■□□□□ 0.75
COL5A2P05997 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 BX088702.1-201ENST00000610784 235 ntBASIC19.72■□□□□ 0.75
COL5A2P05997 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL5A2P05997 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.72■□□□□ 0.75
COL5A2P05997 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms