Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
IFNA1P01562 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 AC097359.2-201ENST00000604992 2389 ntBASIC12.25□□□□□ -0.45
IFNA1P01562 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.25□□□□□ -0.45
IFNA1P01562 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
IFNA1P01562 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
IFNA1P01562 BX276092.5-203ENST00000456199 560 ntBASIC12.25□□□□□ -0.45
IFNA1P01562 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.25□□□□□ -0.45
IFNA1P01562 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.25□□□□□ -0.45
IFNA1P01562 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.25□□□□□ -0.45
IFNA1P01562 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.25□□□□□ -0.45
IFNA1P01562 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
IFNA1P01562 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
IFNA1P01562 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 AL139288.1-201ENST00000623748 933 ntBASIC12.25□□□□□ -0.45
IFNA1P01562 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.25□□□□□ -0.45
IFNA1P01562 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
IFNA1P01562 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.25□□□□□ -0.45
IFNA1P01562 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
IFNA1P01562 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.25□□□□□ -0.45
IFNA1P01562 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.24□□□□□ -0.45
IFNA1P01562 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.24□□□□□ -0.45
IFNA1P01562 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.24□□□□□ -0.45
IFNA1P01562 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.24□□□□□ -0.45
IFNA1P01562 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
IFNA1P01562 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
IFNA1P01562 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
IFNA1P01562 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
IFNA1P01562 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.24□□□□□ -0.45
IFNA1P01562 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
IFNA1P01562 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.24□□□□□ -0.45
IFNA1P01562 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.24□□□□□ -0.45
IFNA1P01562 AL137013.1-201ENST00000432946 1228 ntBASIC12.24□□□□□ -0.45
IFNA1P01562 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.24□□□□□ -0.45
IFNA1P01562 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.24□□□□□ -0.45
IFNA1P01562 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.24□□□□□ -0.45
IFNA1P01562 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
IFNA1P01562 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.24□□□□□ -0.45
IFNA1P01562 AL121672.3-201ENST00000608644 468 ntBASIC12.24□□□□□ -0.45
IFNA1P01562 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.24□□□□□ -0.45
IFNA1P01562 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 AC018892.3-201ENST00000623986 2499 ntBASIC12.24□□□□□ -0.45
IFNA1P01562 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.24□□□□□ -0.45
IFNA1P01562 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.24□□□□□ -0.45
IFNA1P01562 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
IFNA1P01562 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.24□□□□□ -0.45
IFNA1P01562 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.23□□□□□ -0.45
IFNA1P01562 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.23□□□□□ -0.45
IFNA1P01562 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.23□□□□□ -0.45
IFNA1P01562 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms