Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.35■□□□□ 0.21
TIMP1P01033 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TIMP1P01033 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
TIMP1P01033 AC005632.3-201ENST00000605544 308 ntBASIC16.35■□□□□ 0.21
TIMP1P01033 AC007881.3-201ENST00000608897 607 ntBASIC16.35■□□□□ 0.21
TIMP1P01033 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TIMP1P01033 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.35■□□□□ 0.21
TIMP1P01033 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.35■□□□□ 0.21
TIMP1P01033 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TIMP1P01033 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TIMP1P01033 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.35■□□□□ 0.21
TIMP1P01033 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TIMP1P01033 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TIMP1P01033 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TIMP1P01033 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMP1P01033 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.35■□□□□ 0.21
TIMP1P01033 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TIMP1P01033 MST1L-201ENST00000442552 2185 ntBASIC16.34■□□□□ 0.21
TIMP1P01033 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.34■□□□□ 0.21
TIMP1P01033 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TIMP1P01033 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMP1P01033 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 AC022211.2-201ENST00000585075 2527 ntBASIC16.34■□□□□ 0.21
TIMP1P01033 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
TIMP1P01033 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 RN7SKP230-201ENST00000365642 335 ntBASIC16.34■□□□□ 0.21
TIMP1P01033 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 MIR1227-201ENST00000408484 88 ntBASIC16.34■□□□□ 0.21
TIMP1P01033 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMP1P01033 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.34■□□□□ 0.21
TIMP1P01033 PIN4P1-201ENST00000451079 396 ntBASIC16.34■□□□□ 0.21
TIMP1P01033 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.34■□□□□ 0.21
TIMP1P01033 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TIMP1P01033 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.34■□□□□ 0.21
TIMP1P01033 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TIMP1P01033 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMP1P01033 AC005357.2-202ENST00000590507 1060 ntBASIC16.34■□□□□ 0.21
TIMP1P01033 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.34■□□□□ 0.21
TIMP1P01033 TNRC18P3-201ENST00000441896 2691 ntBASIC16.34■□□□□ 0.21
TIMP1P01033 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.34■□□□□ 0.21
TIMP1P01033 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TIMP1P01033 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMP1P01033 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TIMP1P01033 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMP1P01033 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMP1P01033 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.33■□□□□ 0.21
TIMP1P01033 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TIMP1P01033 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
TIMP1P01033 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TIMP1P01033 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMP1P01033 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMP1P01033 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMP1P01033 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TIMP1P01033 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMP1P01033 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TIMP1P01033 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.33■□□□□ 0.2
TIMP1P01033 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TIMP1P01033 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TIMP1P01033 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.33■□□□□ 0.2
TIMP1P01033 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 AC012362.1-201ENST00000434906 739 ntBASIC16.33■□□□□ 0.2
TIMP1P01033 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.33■□□□□ 0.2
TIMP1P01033 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.33■□□□□ 0.2
TIMP1P01033 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMP1P01033 AL157792.1-201ENST00000488281 530 ntBASIC16.33■□□□□ 0.2
TIMP1P01033 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TIMP1P01033 RBM8B-201ENST00000555532 525 ntBASIC16.33■□□□□ 0.2
TIMP1P01033 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.33■□□□□ 0.2
TIMP1P01033 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMP1P01033 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.33■□□□□ 0.2
TIMP1P01033 MEG3_2.1-201ENST00000611456 105 ntBASIC16.33■□□□□ 0.2
TIMP1P01033 MIR6720-201ENST00000611664 98 ntBASIC16.33■□□□□ 0.2
TIMP1P01033 AL157813.1-201ENST00000612996 587 ntBASIC16.33■□□□□ 0.2
TIMP1P01033 LINC01783-202ENST00000614408 828 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms