Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALDH1A1P00352 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.28■□□□□ 0.36
ALDH1A1P00352 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALDH1A1P00352 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALDH1A1P00352 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
ALDH1A1P00352 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.27■□□□□ 0.36
ALDH1A1P00352 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALDH1A1P00352 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALDH1A1P00352 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALDH1A1P00352 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALDH1A1P00352 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALDH1A1P00352 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALDH1A1P00352 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.27■□□□□ 0.36
ALDH1A1P00352 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.27■□□□□ 0.36
ALDH1A1P00352 RPL5P21-201ENST00000404620 815 ntBASIC17.27■□□□□ 0.36
ALDH1A1P00352 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.27■□□□□ 0.36
ALDH1A1P00352 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.27■□□□□ 0.36
ALDH1A1P00352 AL627422.1-201ENST00000434104 580 ntBASIC17.27■□□□□ 0.36
ALDH1A1P00352 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.27■□□□□ 0.36
ALDH1A1P00352 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ALDH1A1P00352 C2orf69P1-201ENST00000563532 1093 ntBASIC17.27■□□□□ 0.36
ALDH1A1P00352 PHBP15-201ENST00000574228 665 ntBASIC17.27■□□□□ 0.36
ALDH1A1P00352 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.27■□□□□ 0.36
ALDH1A1P00352 Z98259.2-201ENST00000641583 609 ntBASIC17.27■□□□□ 0.36
ALDH1A1P00352 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
ALDH1A1P00352 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ALDH1A1P00352 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALDH1A1P00352 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.27■□□□□ 0.35
ALDH1A1P00352 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALDH1A1P00352 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALDH1A1P00352 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
ALDH1A1P00352 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
ALDH1A1P00352 AC006058.4-201ENST00000624016 1670 ntBASIC17.26■□□□□ 0.35
ALDH1A1P00352 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 LYPLA2P1-203ENST00000447689 696 ntBASIC17.26■□□□□ 0.35
ALDH1A1P00352 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 ALG1L6P-201ENST00000515248 758 ntBASIC17.26■□□□□ 0.35
ALDH1A1P00352 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 AC005962.1-201ENST00000584100 773 ntBASIC17.26■□□□□ 0.35
ALDH1A1P00352 AL157813.1-201ENST00000612996 587 ntBASIC17.26■□□□□ 0.35
ALDH1A1P00352 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 AP001527.2-201ENST00000614441 631 ntBASIC17.26■□□□□ 0.35
ALDH1A1P00352 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 AC018695.7-201ENST00000624587 2492 ntBASIC17.26■□□□□ 0.35
ALDH1A1P00352 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.26■□□□□ 0.35
ALDH1A1P00352 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALDH1A1P00352 FZD10-202ENST00000539839 3282 ntBASIC17.25■□□□□ 0.35
ALDH1A1P00352 AL133373.2-201ENST00000623187 2828 ntBASIC17.25■□□□□ 0.35
ALDH1A1P00352 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.25■□□□□ 0.35
ALDH1A1P00352 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 AL645608.8-201ENST00000606034 2086 ntBASIC17.25■□□□□ 0.35
ALDH1A1P00352 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALDH1A1P00352 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms