Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.16■□□□□ 0.02
CPNE6O95741 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE6O95741 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CPNE6O95741 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.15■□□□□ 0.02
CPNE6O95741 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE6O95741 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE6O95741 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CPNE6O95741 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE6O95741 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CPNE6O95741 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE6O95741 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.15■□□□□ 0.02
CPNE6O95741 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE6O95741 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE6O95741 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE6O95741 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.15■□□□□ 0.02
CPNE6O95741 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.15■□□□□ 0.02
CPNE6O95741 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE6O95741 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE6O95741 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 PTP4A1P2-201ENST00000546033 454 ntBASIC15.15■□□□□ 0.02
CPNE6O95741 SNX29P1-201ENST00000548357 1007 ntBASIC15.15■□□□□ 0.02
CPNE6O95741 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.15■□□□□ 0.02
CPNE6O95741 AC124283.3-201ENST00000570869 594 ntBASIC15.15■□□□□ 0.02
CPNE6O95741 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.15■□□□□ 0.02
CPNE6O95741 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE6O95741 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CPNE6O95741 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 MIR648-201ENST00000385046 94 ntBASIC15.14■□□□□ 0.01
CPNE6O95741 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 C1QBPP1-201ENST00000400117 770 ntBASIC15.14■□□□□ 0.01
CPNE6O95741 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.14■□□□□ 0.01
CPNE6O95741 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE6O95741 AC120045.2-201ENST00000567334 178 ntBASIC15.14■□□□□ 0.01
CPNE6O95741 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPNE6O95741 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE6O95741 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms