Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PEX1O43933 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
PEX1O43933 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PEX1O43933 SPDYE7P-202ENST00000420373 878 ntBASIC15.13■□□□□ 0.01
PEX1O43933 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.13■□□□□ 0.01
PEX1O43933 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.13■□□□□ 0.01
PEX1O43933 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.13■□□□□ 0.01
PEX1O43933 SPDYE14P-201ENST00000442619 822 ntBASIC15.13■□□□□ 0.01
PEX1O43933 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.13■□□□□ 0.01
PEX1O43933 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.13■□□□□ 0.01
PEX1O43933 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.13■□□□□ 0.01
PEX1O43933 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.13■□□□□ 0.01
PEX1O43933 ALG1L8P-201ENST00000533887 760 ntBASIC15.13■□□□□ 0.01
PEX1O43933 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.13■□□□□ 0.01
PEX1O43933 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PEX1O43933 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PEX1O43933 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.13■□□□□ 0.01
PEX1O43933 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PEX1O43933 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PEX1O43933 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PEX1O43933 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PEX1O43933 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.13■□□□□ 0.01
PEX1O43933 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.13■□□□□ 0.01
PEX1O43933 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.13■□□□□ 0.01
PEX1O43933 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PEX1O43933 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PEX1O43933 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PEX1O43933 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PEX1O43933 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.13■□□□□ 0.01
PEX1O43933 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
PEX1O43933 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PEX1O43933 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PEX1O43933 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PEX1O43933 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
PEX1O43933 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.12■□□□□ 0.01
PEX1O43933 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.12■□□□□ 0.01
PEX1O43933 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PEX1O43933 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.12■□□□□ 0.01
PEX1O43933 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 HSPA7-201ENST00000445535 1927 ntBASIC15.12■□□□□ 0.01
PEX1O43933 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.12■□□□□ 0.01
PEX1O43933 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.12■□□□□ 0.01
PEX1O43933 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.12■□□□□ 0.01
PEX1O43933 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 DUX4L27-201ENST00000554796 1261 ntBASIC15.12■□□□□ 0.01
PEX1O43933 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.12■□□□□ 0.01
PEX1O43933 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.12■□□□□ 0.01
PEX1O43933 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PEX1O43933 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PEX1O43933 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PEX1O43933 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PEX1O43933 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.12■□□□□ 0.01
PEX1O43933 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.11■□□□□ 0.01
PEX1O43933 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.11■□□□□ 0.01
PEX1O43933 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PEX1O43933 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.11■□□□□ 0.01
PEX1O43933 AC107918.4-201ENST00000641966 3141 ntBASIC15.11■□□□□ 0.01
PEX1O43933 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PEX1O43933 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.11■□□□□ 0.01
PEX1O43933 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PEX1O43933 LINC01230-201ENST00000625222 3017 ntBASIC15.11■□□□□ 0.01
PEX1O43933 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.11■□□□□ 0.01
PEX1O43933 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PEX1O43933 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms