Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD1O14646 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
CHD1O14646 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC23.97■■□□□ 1.43
CHD1O14646 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD1O14646 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CHD1O14646 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHD1O14646 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC23.97■■□□□ 1.43
CHD1O14646 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHD1O14646 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC23.97■■□□□ 1.43
CHD1O14646 AL451000.1-201ENST00000451300 1186 ntBASIC23.97■■□□□ 1.43
CHD1O14646 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC23.97■■□□□ 1.43
CHD1O14646 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC23.97■■□□□ 1.43
CHD1O14646 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD1O14646 MT2A-202ENST00000561491 581 ntTSL 2 BASIC23.97■■□□□ 1.43
CHD1O14646 AL590440.2-201ENST00000641973 1595 ntBASIC23.97■■□□□ 1.43
CHD1O14646 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD1O14646 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD1O14646 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHD1O14646 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHD1O14646 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD1O14646 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD1O14646 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHD1O14646 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CHD1O14646 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHD1O14646 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CHD1O14646 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CHD1O14646 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CHD1O14646 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHD1O14646 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC23.96■■□□□ 1.43
CHD1O14646 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC23.96■■□□□ 1.43
CHD1O14646 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CHD1O14646 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC23.96■■□□□ 1.43
CHD1O14646 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC23.96■■□□□ 1.43
CHD1O14646 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC23.96■■□□□ 1.43
CHD1O14646 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHD1O14646 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CHD1O14646 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC23.96■■□□□ 1.43
CHD1O14646 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC23.96■■□□□ 1.43
CHD1O14646 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC23.96■■□□□ 1.43
CHD1O14646 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHD1O14646 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHD1O14646 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC23.96■■□□□ 1.43
CHD1O14646 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC23.96■■□□□ 1.43
CHD1O14646 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC23.96■■□□□ 1.43
CHD1O14646 OR51A9P-201ENST00000422578 911 ntBASIC23.96■■□□□ 1.43
CHD1O14646 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC23.96■■□□□ 1.43
CHD1O14646 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC23.96■■□□□ 1.43
CHD1O14646 AL353622.2-201ENST00000605846 425 ntBASIC23.96■■□□□ 1.43
CHD1O14646 HELLS-212ENST00000630929 400 ntTSL 5 BASIC23.96■■□□□ 1.43
CHD1O14646 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
CHD1O14646 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC23.95■■□□□ 1.43
CHD1O14646 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CHD1O14646 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.95■■□□□ 1.43
CHD1O14646 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
CHD1O14646 REXO1L2P-201ENST00000425429 2069 ntBASIC23.95■■□□□ 1.42
CHD1O14646 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC23.95■■□□□ 1.42
CHD1O14646 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
CHD1O14646 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHD1O14646 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHD1O14646 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
CHD1O14646 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHD1O14646 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHD1O14646 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CHD1O14646 AC003686.1-201ENST00000550956 1034 ntBASIC23.95■■□□□ 1.42
CHD1O14646 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC23.95■■□□□ 1.42
CHD1O14646 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC23.95■■□□□ 1.42
CHD1O14646 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC23.95■■□□□ 1.42
CHD1O14646 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CHD1O14646 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC23.95■■□□□ 1.42
CHD1O14646 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC23.95■■□□□ 1.42
CHD1O14646 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHD1O14646 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC23.95■■□□□ 1.42
CHD1O14646 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHD1O14646 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC23.94■■□□□ 1.42
CHD1O14646 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC23.94■■□□□ 1.42
CHD1O14646 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC23.94■■□□□ 1.42
CHD1O14646 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC23.94■■□□□ 1.42
CHD1O14646 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHD1O14646 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CHD1O14646 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHD1O14646 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC23.94■■□□□ 1.42
CHD1O14646 SNORA57-201ENST00000383870 149 ntBASIC23.94■■□□□ 1.42
CHD1O14646 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC23.94■■□□□ 1.42
CHD1O14646 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC23.94■■□□□ 1.42
CHD1O14646 IGKV1OR-2-201ENST00000457995 350 ntBASIC23.94■■□□□ 1.42
CHD1O14646 AC023906.1-201ENST00000486386 453 ntBASIC23.94■■□□□ 1.42
CHD1O14646 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC23.94■■□□□ 1.42
CHD1O14646 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC23.94■■□□□ 1.42
CHD1O14646 AC131206.1-201ENST00000538078 1211 ntBASIC23.94■■□□□ 1.42
CHD1O14646 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC23.94■■□□□ 1.42
CHD1O14646 AC023968.2-201ENST00000560593 1049 ntBASIC23.94■■□□□ 1.42
CHD1O14646 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC23.94■■□□□ 1.42
CHD1O14646 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC23.94■■□□□ 1.42
CHD1O14646 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHD1O14646 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
CHD1O14646 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC23.94■■□□□ 1.42
CHD1O14646 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHD1O14646 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHD1O14646 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHD1O14646 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms