Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A1O00337 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SLC28A1O00337 AC104457.1-201ENST00000401024 814 ntBASIC14.87□□□□□ -0.03
SLC28A1O00337 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A1O00337 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SLC28A1O00337 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A1O00337 HLA-J-203ENST00000494367 1087 ntBASIC14.87□□□□□ -0.03
SLC28A1O00337 SDHAP3-202ENST00000515467 728 ntBASIC14.87□□□□□ -0.03
SLC28A1O00337 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 AL512361.1-201ENST00000554200 418 ntBASIC14.87□□□□□ -0.03
SLC28A1O00337 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A1O00337 TEX28P1-201ENST00000613479 1221 ntBASIC14.87□□□□□ -0.03
SLC28A1O00337 TEX28P2-201ENST00000617764 1221 ntBASIC14.87□□□□□ -0.03
SLC28A1O00337 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC28A1O00337 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC28A1O00337 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC28A1O00337 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SLC28A1O00337 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC28A1O00337 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC28A1O00337 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
SLC28A1O00337 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SLC28A1O00337 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A1O00337 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A1O00337 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC28A1O00337 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC28A1O00337 CICP14-201ENST00000629111 2732 ntBASIC14.86□□□□□ -0.03
SLC28A1O00337 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SLC28A1O00337 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SLC28A1O00337 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC28A1O00337 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A1O00337 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC28A1O00337 AC092865.5-201ENST00000545435 363 ntBASIC14.86□□□□□ -0.03
SLC28A1O00337 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC28A1O00337 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC28A1O00337 AC051619.7-201ENST00000568314 623 ntBASIC14.86□□□□□ -0.03
SLC28A1O00337 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A1O00337 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC28A1O00337 SPDYE12P-201ENST00000618416 771 ntBASIC14.86□□□□□ -0.03
SLC28A1O00337 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A1O00337 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SLC28A1O00337 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A1O00337 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC28A1O00337 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
SLC28A1O00337 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A1O00337 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC28A1O00337 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC28A1O00337 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SLC28A1O00337 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SLC28A1O00337 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SLC28A1O00337 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
SLC28A1O00337 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SLC28A1O00337 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SLC28A1O00337 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
SLC28A1O00337 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC28A1O00337 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SLC28A1O00337 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC28A1O00337 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A1O00337 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SLC28A1O00337 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms