Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKBIEO00221 AP003392.6-201ENST00000607709 325 ntBASIC18.16■□□□□ 0.5
NFKBIEO00221 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.16■□□□□ 0.5
NFKBIEO00221 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.16■□□□□ 0.5
NFKBIEO00221 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.16■□□□□ 0.5
NFKBIEO00221 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.16■□□□□ 0.5
NFKBIEO00221 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.16■□□□□ 0.5
NFKBIEO00221 AP001184.1-201ENST00000637936 376 ntBASIC18.16■□□□□ 0.5
NFKBIEO00221 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NFKBIEO00221 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKBIEO00221 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKBIEO00221 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKBIEO00221 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKBIEO00221 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.16■□□□□ 0.5
NFKBIEO00221 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.16■□□□□ 0.5
NFKBIEO00221 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKBIEO00221 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.16■□□□□ 0.5
NFKBIEO00221 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NFKBIEO00221 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NFKBIEO00221 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFKBIEO00221 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NFKBIEO00221 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.15■□□□□ 0.5
NFKBIEO00221 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.15■□□□□ 0.5
NFKBIEO00221 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 RPSAP15-201ENST00000448168 861 ntBASIC18.15■□□□□ 0.5
NFKBIEO00221 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.15■□□□□ 0.5
NFKBIEO00221 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.15■□□□□ 0.5
NFKBIEO00221 CICP12-201ENST00000455801 843 ntBASIC18.15■□□□□ 0.5
NFKBIEO00221 ORAOV1P1-201ENST00000503108 395 ntBASIC18.15■□□□□ 0.5
NFKBIEO00221 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NFKBIEO00221 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC18.15■□□□□ 0.5
NFKBIEO00221 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.15■□□□□ 0.5
NFKBIEO00221 MIR3180-2-201ENST00000581748 88 ntBASIC18.15■□□□□ 0.5
NFKBIEO00221 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.15■□□□□ 0.5
NFKBIEO00221 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
NFKBIEO00221 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.15■□□□□ 0.5
NFKBIEO00221 AC244250.3-201ENST00000620749 366 ntBASIC18.15■□□□□ 0.5
NFKBIEO00221 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.15■□□□□ 0.5
NFKBIEO00221 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFKBIEO00221 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.15■□□□□ 0.5
NFKBIEO00221 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NFKBIEO00221 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NFKBIEO00221 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.14■□□□□ 0.5
NFKBIEO00221 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
NFKBIEO00221 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
NFKBIEO00221 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
NFKBIEO00221 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.14■□□□□ 0.49
NFKBIEO00221 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 BAK1P1-201ENST00000317045 636 ntBASIC18.14■□□□□ 0.49
NFKBIEO00221 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.14■□□□□ 0.49
NFKBIEO00221 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.14■□□□□ 0.49
NFKBIEO00221 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 FTH1P22-201ENST00000456305 520 ntBASIC18.14■□□□□ 0.49
NFKBIEO00221 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 RN7SL81P-201ENST00000493781 261 ntBASIC18.14■□□□□ 0.49
NFKBIEO00221 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NFKBIEO00221 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
NFKBIEO00221 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NFKBIEO00221 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.14■□□□□ 0.49
NFKBIEO00221 AL118516.1-201ENST00000564152 670 ntBASIC18.14■□□□□ 0.49
NFKBIEO00221 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
NFKBIEO00221 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.14■□□□□ 0.49
NFKBIEO00221 AC007326.1-201ENST00000604539 458 ntBASIC18.14■□□□□ 0.49
NFKBIEO00221 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.14■□□□□ 0.49
NFKBIEO00221 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.14■□□□□ 0.49
NFKBIEO00221 KRT18P9-201ENST00000604826 1300 ntBASIC18.14■□□□□ 0.49
NFKBIEO00221 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
NFKBIEO00221 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.14■□□□□ 0.49
NFKBIEO00221 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.14■□□□□ 0.49
NFKBIEO00221 KRT8P31-201ENST00000504812 1408 ntBASIC18.14■□□□□ 0.49
NFKBIEO00221 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NFKBIEO00221 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms