Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 PPP1R14BP5-201ENST00000440334 435 ntBASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 KRT16P5-201ENST00000455284 522 ntBASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 UNC93B4-201ENST00000505679 747 ntBASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 AC113404.2-201ENST00000507884 177 ntBASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 AC112698.1-201ENST00000510299 916 ntBASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 AF201337.1-201ENST00000520239 748 ntBASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 AC026271.3-201ENST00000571884 352 ntBASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 MAZ-216ENST00000616501 991 ntTSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 CFAP65-202ENST00000341552 5953 ntAPPRIS P4 TSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 TCAF2-204ENST00000441159 5568 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 TBC1D3P5-201ENST00000579401 1545 ntBASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 VENTXP1-201ENST00000569334 2716 ntBASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC01694-202ENST00000441095 6721 ntTSL 3 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 GXYLT1P2-201ENST00000433312 1230 ntBASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 CNP-204ENST00000472031 1019 ntTSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 BNIP3P1-202ENST00000550043 1585 ntBASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 AC109462.3-201ENST00000573934 613 ntBASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms