Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC105917.1-201ENST00000506637 2539 ntBASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 AC092850.2-201ENST00000623821 2697 ntBASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 CTBP2P5-201ENST00000454986 1264 ntBASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 AC119751.2-201ENST00000504529 210 ntBASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 AC068587.3-201ENST00000526613 355 ntBASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 MIR6799-201ENST00000620297 69 ntBASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA2E9PIF3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA2E9PIF3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms