Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 MIR346-201ENST00000362234 95 ntBASIC13.43□□□□□ -0.26
SHISA3A0PJX4 HLA-H-201ENST00000383620 1096 ntBASIC13.43□□□□□ -0.26
SHISA3A0PJX4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 AC074386.1-202ENST00000463561 864 ntBASIC13.43□□□□□ -0.26
SHISA3A0PJX4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 TCAF1P1-201ENST00000414990 2232 ntBASIC13.42□□□□□ -0.26
SHISA3A0PJX4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 RNA5SP419-201ENST00000515908 135 ntBASIC13.42□□□□□ -0.26
SHISA3A0PJX4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 AP000842.3-202ENST00000569238 1080 ntBASIC13.42□□□□□ -0.26
SHISA3A0PJX4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 AC064836.3-201ENST00000607928 673 ntBASIC13.42□□□□□ -0.26
SHISA3A0PJX4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms