Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 AC091812.2-201ENST00000619081 385 ntBASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRAV5A0A0B4J249 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 AC027601.5-201ENST00000624065 2482 ntBASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 AC009078.2-202ENST00000463353 338 ntBASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 AC006504.5-208ENST00000588784 2401 ntBASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 AP3S2-216ENST00000617003 1561 ntBASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV5A0A0B4J249 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
TRAV5A0A0B4J249 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
TRAV5A0A0B4J249 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.02□□□□□ -0.48
TRAV5A0A0B4J249 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV5A0A0B4J249 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV5A0A0B4J249 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
TRAV5A0A0B4J249 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
TRAV5A0A0B4J249 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.02□□□□□ -0.48
TRAV5A0A0B4J249 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV5A0A0B4J249 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TRAV5A0A0B4J249 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms