Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 AP000550.4-202ENST00000639755 178 ntBASIC14.64□□□□□ -0.07
AP4S1Q9Y587 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 MST1P2-201ENST00000457982 2291 ntBASIC14.64□□□□□ -0.07
AP4S1Q9Y587 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.64□□□□□ -0.07
AP4S1Q9Y587 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 AL136982.4-201ENST00000437689 1740 ntBASIC14.63□□□□□ -0.07
AP4S1Q9Y587 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 AC105339.3-201ENST00000560043 636 ntBASIC14.63□□□□□ -0.07
AP4S1Q9Y587 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 CLEC4GP1-201ENST00000596555 870 ntBASIC14.63□□□□□ -0.07
AP4S1Q9Y587 AL121772.3-201ENST00000610840 674 ntBASIC14.63□□□□□ -0.07
AP4S1Q9Y587 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP4S1Q9Y587 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms