Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 AC243562.1-201ENST00000560672 389 ntBASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 AC087386.2-201ENST00000623212 4637 ntBASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 KRT18P32-201ENST00000424695 1287 ntBASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 AC105233.2-201ENST00000523697 349 ntBASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 AF228730.5-201ENST00000530288 346 ntBASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 AP001160.2-201ENST00000596071 487 ntBASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 MROH4P-201ENST00000431302 1578 ntBASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.78■□□□□ 0.44
R3HCC1Q9Y3T6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 AL356585.2-201ENST00000625078 2396 ntBASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 SPCS2P4-201ENST00000436160 681 ntBASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
R3HCC1Q9Y3T6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 AC005562.1-201ENST00000583030 3219 ntBASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 REXO1L1P-202ENST00000608646 1974 ntBASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms