Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 ABCD1P5-201ENST00000445663 754 ntBASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 SCARNA2-201ENST00000458748 420 ntBASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 AF238378.1-201ENST00000526806 358 ntBASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 AP002469.2-201ENST00000531724 424 ntBASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 AC104692.2-201ENST00000603054 253 ntBASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRCH1Q9Y2L9 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 PAWRP1-201ENST00000451083 565 ntBASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 AL355877.3-201ENST00000622820 899 ntBASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 CICP11-201ENST00000434745 2827 ntBASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRCH1Q9Y2L9 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
LRCH1Q9Y2L9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRCH1Q9Y2L9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.72□□□□□ -0.05
LRCH1Q9Y2L9 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms