Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC21.32■■□□□ 1
TRAK1Q9UPV9 MIR4683-201ENST00000579659 81 ntBASIC21.32■■□□□ 1
TRAK1Q9UPV9 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC21.32■■□□□ 1
TRAK1Q9UPV9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
TRAK1Q9UPV9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAK1Q9UPV9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TRAK1Q9UPV9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAK1Q9UPV9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TRAK1Q9UPV9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.32■■□□□ 1
TRAK1Q9UPV9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAK1Q9UPV9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 INE2-201ENST00000630399 1874 ntBASIC21.31■■□□□ 1
TRAK1Q9UPV9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 AC016700.1-201ENST00000429424 312 ntBASIC21.31■■□□□ 1
TRAK1Q9UPV9 RNA5SP423-201ENST00000517127 109 ntBASIC21.31■■□□□ 1
TRAK1Q9UPV9 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 AL365203.3-201ENST00000609742 2057 ntBASIC21.31■■□□□ 1
TRAK1Q9UPV9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAK1Q9UPV9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC21.31■■□□□ 1
TRAK1Q9UPV9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRAK1Q9UPV9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRAK1Q9UPV9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
TRAK1Q9UPV9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRAK1Q9UPV9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRAK1Q9UPV9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAK1Q9UPV9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAK1Q9UPV9 REXO1L4P-201ENST00000605109 1937 ntBASIC21.3■■□□□ 1
TRAK1Q9UPV9 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 NDUFAB1P1-201ENST00000404262 460 ntBASIC21.3■■□□□ 1
TRAK1Q9UPV9 SERPINA13P-202ENST00000478994 924 ntBASIC21.3■■□□□ 1
TRAK1Q9UPV9 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC21.3■■□□□ 1
TRAK1Q9UPV9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAK1Q9UPV9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
TRAK1Q9UPV9 AL137783.1-201ENST00000623494 1896 ntBASIC21.3■■□□□ 1
TRAK1Q9UPV9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAK1Q9UPV9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC21.3■■□□□ 1
TRAK1Q9UPV9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAK1Q9UPV9 FKBP4P6-201ENST00000457486 1332 ntBASIC21.29■■□□□ 1
TRAK1Q9UPV9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAK1Q9UPV9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAK1Q9UPV9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRAK1Q9UPV9 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAK1Q9UPV9 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 AL136309.1-201ENST00000403917 691 ntBASIC21.29■■□□□ 1
TRAK1Q9UPV9 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 AL354877.1-201ENST00000424412 413 ntBASIC21.29■■□□□ 1
TRAK1Q9UPV9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAK1Q9UPV9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.29■■□□□ 1
TRAK1Q9UPV9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAK1Q9UPV9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms