Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 KRT8P29-201ENST00000420409 1371 ntBASIC15.24■□□□□ 0.03
NCDNQ9UBB6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 AL353637.1-201ENST00000451571 732 ntBASIC15.24■□□□□ 0.03
NCDNQ9UBB6 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 AC012044.1-201ENST00000603431 297 ntBASIC15.24■□□□□ 0.03
NCDNQ9UBB6 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 AL353770.1-201ENST00000614915 403 ntBASIC15.24■□□□□ 0.03
NCDNQ9UBB6 ENPP7P14-201ENST00000621765 1040 ntBASIC15.24■□□□□ 0.03
NCDNQ9UBB6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.24■□□□□ 0.03
NCDNQ9UBB6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.24■□□□□ 0.03
NCDNQ9UBB6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 REXO1L1P-202ENST00000608646 1974 ntBASIC15.24■□□□□ 0.03
NCDNQ9UBB6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCDNQ9UBB6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 GGT3P-204ENST00000453783 1664 ntBASIC15.23■□□□□ 0.03
NCDNQ9UBB6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 AC026691.1-201ENST00000602502 2017 ntBASIC15.23■□□□□ 0.03
NCDNQ9UBB6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 MIR1227-201ENST00000408484 88 ntBASIC15.23■□□□□ 0.03
NCDNQ9UBB6 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 POU5F1P6-201ENST00000466990 990 ntBASIC15.23■□□□□ 0.03
NCDNQ9UBB6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCDNQ9UBB6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCDNQ9UBB6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms