Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MKS1Q9NXB0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
MKS1Q9NXB0 AC105339.1-204ENST00000636249 355 ntBASIC15.21■□□□□ 0.03
MKS1Q9NXB0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MKS1Q9NXB0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.21■□□□□ 0.03
MKS1Q9NXB0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MKS1Q9NXB0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
MKS1Q9NXB0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
MKS1Q9NXB0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MKS1Q9NXB0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.21■□□□□ 0.02
MKS1Q9NXB0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MKS1Q9NXB0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.21■□□□□ 0.02
MKS1Q9NXB0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.21■□□□□ 0.02
MKS1Q9NXB0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MKS1Q9NXB0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MKS1Q9NXB0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 AL080243.2-201ENST00000418783 582 ntBASIC15.2■□□□□ 0.02
MKS1Q9NXB0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 AC004832.2-201ENST00000426397 482 ntBASIC15.2■□□□□ 0.02
MKS1Q9NXB0 SPDYE14P-201ENST00000442619 822 ntBASIC15.2■□□□□ 0.02
MKS1Q9NXB0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 AC003101.2-201ENST00000612557 442 ntBASIC15.2■□□□□ 0.02
MKS1Q9NXB0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKS1Q9NXB0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 HTR5BP-201ENST00000430851 1154 ntBASIC15.19■□□□□ 0.02
MKS1Q9NXB0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 SERBP1P3-201ENST00000459980 809 ntBASIC15.19■□□□□ 0.02
MKS1Q9NXB0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 LINC00628-201ENST00000628516 1289 ntBASIC15.19■□□□□ 0.02
MKS1Q9NXB0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKS1Q9NXB0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms