Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 PES1-203ENST00000402281 2760 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 AL445647.1-201ENST00000606221 3599 ntBASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 STX16-202ENST00000355957 4897 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 AC079140.1-201ENST00000508039 487 ntBASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 PCDHA9-201ENST00000378122 6900 ntBASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 KIF28P-202ENST00000504864 3064 ntBASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 AC018529.2-202ENST00000611482 3087 ntBASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC7.72□□□□□ -1.17
CDC42SE1Q9NRR8 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 AL590552.1-201ENST00000623164 1770 ntBASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 AC010970.1-201ENST00000445125 1848 ntBASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms