Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 AC079336.7-201ENST00000623428 1078 ntBASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 AC105917.1-201ENST00000506637 2539 ntBASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM7Q9NR12 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 AL645937.2-201ENST00000396808 931 ntBASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 AC004066.1-201ENST00000502488 802 ntBASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 PRKXP1-201ENST00000561423 1122 ntBASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 SAMD11P1-201ENST00000571429 661 ntBASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 RN7SL574P-201ENST00000581512 297 ntBASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM7Q9NR12 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 TUBBP5-203ENST00000508529 1334 ntBASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 GHSR-202ENST00000427970 912 ntBASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 AC008267.1-201ENST00000474858 1069 ntBASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.03■□□□□ 0.32
PDLIM7Q9NR12 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms