Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 ATP5G2P4-201ENST00000442175 420 ntBASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 AC105917.1-201ENST00000506637 2539 ntBASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
VAT1LQ9HCJ6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 AC007787.1-201ENST00000588095 1583 ntBASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.83■□□□□ 0.45
VAT1LQ9HCJ6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 AC106886.1-201ENST00000568660 600 ntBASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 AL359258.3-201ENST00000622910 2331 ntBASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.83■□□□□ 0.44
VAT1LQ9HCJ6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 ACKR1-201ENST00000368121 1240 ntBASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 RPL5P21-201ENST00000404620 815 ntBASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 AC244107.1-201ENST00000442033 332 ntBASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 AC012441.1-201ENST00000446669 685 ntBASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 AL355864.2-201ENST00000447420 863 ntBASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 AC004066.1-201ENST00000502488 802 ntBASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 AC017083.2-201ENST00000608069 979 ntBASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 AL022328.1-201ENST00000610050 478 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms