Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 AL139094.1-201ENST00000405549 1188 ntBASIC18.12■□□□□ 0.49
RNF41Q9H4P4 KLF2P2-201ENST00000416807 1039 ntBASIC18.12■□□□□ 0.49
RNF41Q9H4P4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 AC008735.3-201ENST00000596646 500 ntBASIC18.12■□□□□ 0.49
RNF41Q9H4P4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 AC134312.5-201ENST00000568031 1313 ntBASIC18.12■□□□□ 0.49
RNF41Q9H4P4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF41Q9H4P4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 RNU1-114P-201ENST00000365297 166 ntBASIC18.11■□□□□ 0.49
RNF41Q9H4P4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 AL360270.3-201ENST00000609118 1348 ntBASIC18.11■□□□□ 0.49
RNF41Q9H4P4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 KRT8P14-201ENST00000414254 1442 ntBASIC18.11■□□□□ 0.49
RNF41Q9H4P4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 AC006486.2-201ENST00000624246 2199 ntBASIC18.11■□□□□ 0.49
RNF41Q9H4P4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF41Q9H4P4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF41Q9H4P4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms