Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 AL121723.1-201ENST00000445194 1519 ntBASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 AC140878.1-201ENST00000565277 250 ntBASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF3BQ9BZI7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 AL133267.1-201ENST00000398220 340 ntBASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 TREML5P-201ENST00000421694 576 ntBASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 AC025181.2-201ENST00000606994 802 ntBASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.43■□□□□ 0.54
UPF3BQ9BZI7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 CICP14-201ENST00000629111 2732 ntBASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 GHSR-202ENST00000427970 912 ntBASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 AC097493.3-201ENST00000509725 367 ntBASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 AC015911.4-201ENST00000588022 1070 ntBASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF3BQ9BZI7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms