Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 AL589987.1-201ENST00000453380 819 ntBASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 AC055876.2-201ENST00000531834 546 ntBASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 AL391825.1-201ENST00000457671 1364 ntBASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 AC023908.3-201ENST00000564211 3047 ntBASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PCGF1Q9BSM1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.02□□□□□ -0.32
PCGF1Q9BSM1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 MEP1AP4-201ENST00000423244 1087 ntBASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 API5-211ENST00000534695 560 ntTSL 5 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC023310.3-201ENST00000557027 670 ntBASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC100756.1-201ENST00000562736 682 ntBASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC138749.3-201ENST00000567691 622 ntBASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 TP53TG3HP-202ENST00000569755 579 ntBASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AL450472.2-201ENST00000603663 1156 ntBASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC116165.1-201ENST00000611806 668 ntBASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC004790.1-201ENST00000612686 536 ntBASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC007431.3-201ENST00000623221 587 ntBASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC139749.1-202ENST00000617529 3139 ntBASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AL359258.3-201ENST00000622910 2331 ntBASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms