Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 AL049840.4-201ENST00000602422 811 ntBASIC18.24■□□□□ 0.51
NEK1Q96PY6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 MIR8072-201ENST00000614241 80 ntBASIC18.24■□□□□ 0.51
NEK1Q96PY6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 SLC7A15P-201ENST00000424028 1363 ntBASIC18.24■□□□□ 0.51
NEK1Q96PY6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.24■□□□□ 0.51
NEK1Q96PY6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NEK1Q96PY6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 MIR661-201ENST00000384842 89 ntBASIC18.23■□□□□ 0.51
NEK1Q96PY6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 AC004066.1-201ENST00000502488 802 ntBASIC18.23■□□□□ 0.51
NEK1Q96PY6 AC026410.3-201ENST00000514280 936 ntBASIC18.23■□□□□ 0.51
NEK1Q96PY6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 AC055876.2-201ENST00000531834 546 ntBASIC18.23■□□□□ 0.51
NEK1Q96PY6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 AC099568.2-201ENST00000609194 695 ntBASIC18.23■□□□□ 0.51
NEK1Q96PY6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NEK1Q96PY6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.23■□□□□ 0.51
NEK1Q96PY6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 AC067930.6-201ENST00000623257 4947 ntBASIC18.22■□□□□ 0.51
NEK1Q96PY6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEK1Q96PY6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEK1Q96PY6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 VDAC1P7-201ENST00000462417 847 ntBASIC18.22■□□□□ 0.51
NEK1Q96PY6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEK1Q96PY6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 AC107373.2-201ENST00000607735 490 ntBASIC18.22■□□□□ 0.51
NEK1Q96PY6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEK1Q96PY6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEK1Q96PY6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEK1Q96PY6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEK1Q96PY6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NEK1Q96PY6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NEK1Q96PY6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
NEK1Q96PY6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NEK1Q96PY6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.21■□□□□ 0.51
NEK1Q96PY6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms