Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 SAMD11P1-201ENST00000571429 661 ntBASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC85AQ96PX6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 HOMER2P2-201ENST00000451621 847 ntBASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 AC104306.2-201ENST00000451877 341 ntBASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 AL365203.3-201ENST00000609742 2057 ntBASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC85AQ96PX6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 MST1L-201ENST00000442552 2185 ntBASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 MIR1247-201ENST00000408206 136 ntBASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 Z93015.1-201ENST00000451718 390 ntBASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 AL606495.2-201ENST00000605867 535 ntBASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 AL133338.1-201ENST00000565695 1517 ntBASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC85AQ96PX6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms