Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 U1.21-201ENST00000580816 167 ntBASIC11.76□□□□□ -0.53
AP1S3Q96PC3 AC025062.2-201ENST00000605477 670 ntBASIC11.76□□□□□ -0.53
AP1S3Q96PC3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 AC091076.1-201ENST00000610741 619 ntBASIC11.76□□□□□ -0.53
AP1S3Q96PC3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 AC107918.4-202ENST00000641623 219 ntBASIC11.76□□□□□ -0.53
AP1S3Q96PC3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 AC005562.1-201ENST00000583030 3219 ntBASIC11.76□□□□□ -0.53
AP1S3Q96PC3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
AP1S3Q96PC3 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 AC232323.1-201ENST00000540724 2099 ntBASIC11.75□□□□□ -0.53
AP1S3Q96PC3 REXO1L5P-201ENST00000622260 2098 ntBASIC11.75□□□□□ -0.53
AP1S3Q96PC3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 PMS2P4-201ENST00000412466 1052 ntBASIC11.75□□□□□ -0.53
AP1S3Q96PC3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 KRT18P21-201ENST00000515767 1272 ntBASIC11.75□□□□□ -0.53
AP1S3Q96PC3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 AC008667.4-201ENST00000607370 168 ntBASIC11.75□□□□□ -0.53
AP1S3Q96PC3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 AC012313.8-201ENST00000595059 5402 ntBASIC11.75□□□□□ -0.53
AP1S3Q96PC3 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
AP1S3Q96PC3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 AL023775.1-201ENST00000454907 1746 ntBASIC11.74□□□□□ -0.53
AP1S3Q96PC3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms