Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SPDYE14P-201ENST00000442619 822 ntBASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 AC018529.1-201ENST00000613063 361 ntBASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHAMP1Q96JM3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHAMP1Q96JM3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHAMP1Q96JM3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.89■□□□□ 0.46
CHAMP1Q96JM3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 SPDYE17-201ENST00000412399 783 ntBASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 AC004461.1-201ENST00000412461 403 ntBASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 GHSR-202ENST00000427970 912 ntBASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 AC005237.2-201ENST00000434368 219 ntBASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 AL596442.2-201ENST00000610240 980 ntBASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 AC018442.1-201ENST00000421439 2061 ntBASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.89■□□□□ 0.45
CHAMP1Q96JM3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 HSPA7-201ENST00000445535 1927 ntBASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 MTND6P24-201ENST00000440466 518 ntBASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 RFPL4AP1-201ENST00000530883 850 ntBASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 RN7SL828P-201ENST00000607615 303 ntBASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHAMP1Q96JM3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms