Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATL1Q8WXF7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATL1Q8WXF7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
ATL1Q8WXF7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATL1Q8WXF7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATL1Q8WXF7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATL1Q8WXF7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATL1Q8WXF7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATL1Q8WXF7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.12■□□□□ 0.01
ATL1Q8WXF7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ATL1Q8WXF7 CICP4-201ENST00000447359 2812 ntBASIC15.12■□□□□ 0.01
ATL1Q8WXF7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 AC023024.2-201ENST00000623561 1993 ntBASIC15.11■□□□□ 0.01
ATL1Q8WXF7 SNX18-202ENST00000343017 3140 ntBASIC15.11■□□□□ 0.01
ATL1Q8WXF7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 SRD5A3P1-201ENST00000603021 949 ntBASIC15.11■□□□□ 0.01
ATL1Q8WXF7 AL390955.2-201ENST00000603032 514 ntBASIC15.11■□□□□ 0.01
ATL1Q8WXF7 AC025181.2-201ENST00000606994 802 ntBASIC15.11■□□□□ 0.01
ATL1Q8WXF7 AC008738.7-201ENST00000609744 511 ntBASIC15.11■□□□□ 0.01
ATL1Q8WXF7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATL1Q8WXF7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 MEP1AP4-201ENST00000423244 1087 ntBASIC15.1■□□□□ 0.01
ATL1Q8WXF7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.1■□□□□ 0.01
ATL1Q8WXF7 GHSR-202ENST00000427970 912 ntBASIC15.1■□□□□ 0.01
ATL1Q8WXF7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 AC005498.2-205ENST00000593218 784 ntBASIC15.1■□□□□ 0.01
ATL1Q8WXF7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms