Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC44A1Q8WWI5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 AC138969.3-201ENST00000546612 1459 ntBASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 AC138932.2-201ENST00000548268 1459 ntBASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 AC126755.4-201ENST00000549796 1459 ntBASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 AC004461.1-201ENST00000412461 403 ntBASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 RBPMS2P1-201ENST00000437762 623 ntBASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 AC026150.2-201ENST00000564693 1156 ntBASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 AC025048.3-201ENST00000590609 569 ntBASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 AC005702.4-201ENST00000618393 416 ntBASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 MIR6069-201ENST00000620069 79 ntBASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 OR2I1P-210ENST00000642037 4691 ntBASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 CICP4-201ENST00000447359 2812 ntBASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC44A1Q8WWI5 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 MYO15B-237ENST00000642007 4893 ntBASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
SLC44A1Q8WWI5 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 AC006504.5-208ENST00000588784 2401 ntBASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 RPL13P2-201ENST00000440687 659 ntBASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms