Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
U2AF1L4Q8WU68 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2AF1L4Q8WU68 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
U2AF1L4Q8WU68 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
U2AF1L4Q8WU68 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
U2AF1L4Q8WU68 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
U2AF1L4Q8WU68 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.64■□□□□ 0.41
U2AF1L4Q8WU68 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 RPL17P11-201ENST00000417593 544 ntBASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 MAGEA5-201ENST00000446757 942 ntBASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 AP001582.1-201ENST00000525856 295 ntBASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 HNRNPUP1-201ENST00000554987 333 ntBASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 AC000095.1-201ENST00000603208 874 ntBASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 AC093813.1-201ENST00000605066 256 ntBASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 NFIC-211ENST00000641145 8399 ntBASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
U2AF1L4Q8WU68 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 CYP46A4P-201ENST00000414953 267 ntBASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 POM121L10P-201ENST00000436994 1285 ntBASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 AC126915.1-201ENST00000522847 1038 ntBASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 AC145423.3-201ENST00000615987 467 ntBASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
U2AF1L4Q8WU68 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 AL138709.1-201ENST00000614840 1693 ntBASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
U2AF1L4Q8WU68 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms