Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 AC134915.1-201ENST00000426461 574 ntBASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 GIMAP3P-201ENST00000495150 836 ntBASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 AC099063.4-201ENST00000641099 1602 ntBASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 AL136379.1-201ENST00000623471 2642 ntBASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
FNDC9Q8TBE3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 TTTY23B-201ENST00000442790 549 ntBASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 MYO15B-237ENST00000642007 4893 ntBASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 AC127383.1-201ENST00000444697 1800 ntBASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.92□□□□□ -0.18
FNDC9Q8TBE3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 KRT8P22-201ENST00000562317 1415 ntBASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FNDC9Q8TBE3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms