Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 DRD5P1-201ENST00000456605 1438 ntBASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 DBET-201ENST00000630918 3363 ntBASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 AC126365.1-201ENST00000578585 1514 ntBASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LPCAT1Q8NF37 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 DGCR5-201ENST00000399539 862 ntBASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 AL442647.2-201ENST00000429864 857 ntBASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 AC026410.3-201ENST00000514280 936 ntBASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 AL359711.2-201ENST00000563105 872 ntBASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 AC120045.2-201ENST00000567334 178 ntBASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 TMEM261P1-201ENST00000604899 340 ntBASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT1Q8NF37 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 C1QBPP1-201ENST00000400117 770 ntBASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 GAPDHP40-201ENST00000505218 1006 ntBASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 AC006486.2-201ENST00000624246 2199 ntBASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT1Q8NF37 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms