Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 AC233724.13-201ENST00000598383 410 ntBASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 AC006486.2-201ENST00000624246 2199 ntBASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 HYMAI-201ENST00000635591 3347 ntBASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 KRT8P35-201ENST00000483942 1338 ntBASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 AL360270.3-201ENST00000609118 1348 ntBASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 KRT8P14-201ENST00000414254 1442 ntBASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 MSTO2P-201ENST00000314835 1709 ntBASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 ACTBP8-201ENST00000403258 1108 ntBASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 AP001889.1-201ENST00000525414 633 ntBASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 SLC25A47P1-201ENST00000531577 414 ntBASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 BTNL10-201ENST00000595971 695 ntBASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 MST1L-201ENST00000442552 2185 ntBASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAM1L1Q8N609 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAM1L1Q8N609 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms