Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 AC006058.4-201ENST00000624016 1670 ntBASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC33Q8N5R6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 LINC02228-204ENST00000642115 2962 ntBASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 AC136604.1-201ENST00000418535 575 ntBASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 CROCCP4-201ENST00000457096 498 ntBASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 AC092552.1-201ENST00000547243 906 ntBASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 AC008735.3-201ENST00000596646 500 ntBASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 AC112693.3-201ENST00000624819 1983 ntBASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC33Q8N5R6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC33Q8N5R6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.21■□□□□ 0.18
CCDC33Q8N5R6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
CCDC33Q8N5R6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms