Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 ECM1P1-201ENST00000604092 1279 ntBASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 ENPP7P14-201ENST00000621765 1040 ntBASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SYNPOQ8N3V7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 AL008707.1-201ENST00000422498 534 ntBASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 UPF3AP2-201ENST00000457924 1132 ntBASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 AC079328.1-201ENST00000560358 952 ntBASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 MIR4313-201ENST00000580760 101 ntBASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 NDUFV2P1-201ENST00000596415 907 ntBASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 LRRC59-203ENST00000576448 1531 ntBASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.61■□□□□ 0.09
SYNPOQ8N3V7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.6■□□□□ 0.09
SYNPOQ8N3V7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms