Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 MTX1P1-201ENST00000440904 838 ntBASIC23.71■■□□□ 1.39
VPS8Q8N3P4 Z93015.1-201ENST00000451718 390 ntBASIC23.71■■□□□ 1.39
VPS8Q8N3P4 RPSAP36-202ENST00000494591 1261 ntBASIC23.71■■□□□ 1.39
VPS8Q8N3P4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS8Q8N3P4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
VPS8Q8N3P4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC23.7■■□□□ 1.39
VPS8Q8N3P4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 AC007969.1-201ENST00000433675 447 ntBASIC23.7■■□□□ 1.38
VPS8Q8N3P4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 MIR4783-201ENST00000580343 82 ntBASIC23.7■■□□□ 1.38
VPS8Q8N3P4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS8Q8N3P4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 AC079178.1-201ENST00000420915 656 ntBASIC23.69■■□□□ 1.38
VPS8Q8N3P4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 MIR4683-201ENST00000579659 81 ntBASIC23.69■■□□□ 1.38
VPS8Q8N3P4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC23.69■■□□□ 1.38
VPS8Q8N3P4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 HOMER2P2-201ENST00000451621 847 ntBASIC23.68■■□□□ 1.38
VPS8Q8N3P4 AC108725.1-201ENST00000495472 409 ntBASIC23.68■■□□□ 1.38
VPS8Q8N3P4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 AC131206.1-201ENST00000538078 1211 ntBASIC23.68■■□□□ 1.38
VPS8Q8N3P4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 AL358472.3-201ENST00000608147 415 ntBASIC23.68■■□□□ 1.38
VPS8Q8N3P4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 FKBP4P6-201ENST00000457486 1332 ntBASIC23.68■■□□□ 1.38
VPS8Q8N3P4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VPS8Q8N3P4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms