Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 AC067863.1-201ENST00000494933 530 ntBASIC14.29□□□□□ -0.12
VRK2Q86Y07 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 AL158211.3-201ENST00000607385 239 ntBASIC14.29□□□□□ -0.12
VRK2Q86Y07 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK2Q86Y07 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK2Q86Y07 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 MIR943-201ENST00000401286 94 ntBASIC14.28□□□□□ -0.12
VRK2Q86Y07 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 AC138969.3-201ENST00000546612 1459 ntBASIC14.28□□□□□ -0.12
VRK2Q86Y07 AC138932.2-201ENST00000548268 1459 ntBASIC14.28□□□□□ -0.12
VRK2Q86Y07 AC126755.4-201ENST00000549796 1459 ntBASIC14.28□□□□□ -0.12
VRK2Q86Y07 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.28□□□□□ -0.12
VRK2Q86Y07 AL590560.3-201ENST00000623350 461 ntBASIC14.28□□□□□ -0.12
VRK2Q86Y07 MIR600HG-201ENST00000449175 5984 ntBASIC14.28□□□□□ -0.12
VRK2Q86Y07 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK2Q86Y07 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.27□□□□□ -0.12
VRK2Q86Y07 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VRK2Q86Y07 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK2Q86Y07 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK2Q86Y07 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK2Q86Y07 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK2Q86Y07 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK2Q86Y07 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK2Q86Y07 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
VRK2Q86Y07 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.27□□□□□ -0.12
VRK2Q86Y07 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VRK2Q86Y07 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
VRK2Q86Y07 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms