Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 FAM86HP-204ENST00000513466 959 ntBASIC17.14■□□□□ 0.33
TRIM50Q86XT4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 MIR4741-201ENST00000579822 90 ntBASIC17.14■□□□□ 0.33
TRIM50Q86XT4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 RNA5SP486-201ENST00000515961 83 ntBASIC17.13■□□□□ 0.33
TRIM50Q86XT4 FAM8A2P-201ENST00000528813 1142 ntBASIC17.13■□□□□ 0.33
TRIM50Q86XT4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 DUX4L45-201ENST00000566406 1057 ntBASIC17.13■□□□□ 0.33
TRIM50Q86XT4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 PRSS30P-206ENST00000641773 873 ntBASIC17.13■□□□□ 0.33
TRIM50Q86XT4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM50Q86XT4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 AL139094.1-201ENST00000405549 1188 ntBASIC17.12■□□□□ 0.33
TRIM50Q86XT4 AC114812.1-204ENST00000449669 728 ntBASIC17.12■□□□□ 0.33
TRIM50Q86XT4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 AC099548.2-209ENST00000480264 625 ntBASIC17.12■□□□□ 0.33
TRIM50Q86XT4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM50Q86XT4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms