Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC073911.3-201ENST00000624401 631 ntBASIC10.47□□□□□ -0.73
CSMD3Q7Z407 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 AL512430.1-201ENST00000392575 860 ntBASIC10.47□□□□□ -0.73
CSMD3Q7Z407 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 DUX4L46-201ENST00000566845 751 ntBASIC10.47□□□□□ -0.73
CSMD3Q7Z407 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 AL136295.7-201ENST00000619226 1200 ntBASIC10.47□□□□□ -0.73
CSMD3Q7Z407 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 LINC01165-201ENST00000445190 1623 ntBASIC10.47□□□□□ -0.73
CSMD3Q7Z407 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 RN7SL396P-201ENST00000471086 295 ntBASIC10.47□□□□□ -0.73
CSMD3Q7Z407 REEP5-205ENST00000504247 480 ntTSL 5 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 AC002472.4-201ENST00000641915 272 ntBASIC10.47□□□□□ -0.73
CSMD3Q7Z407 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC10.47□□□□□ -0.73
CSMD3Q7Z407 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 AC239868.1-201ENST00000369385 493 ntBASIC10.46□□□□□ -0.73
CSMD3Q7Z407 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 VDAC1P1-201ENST00000439229 848 ntBASIC10.46□□□□□ -0.73
CSMD3Q7Z407 LYPLA2P1-203ENST00000447689 696 ntBASIC10.46□□□□□ -0.73
CSMD3Q7Z407 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 MME-218ENST00000625667 363 ntTSL 5 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 AL137783.1-201ENST00000623494 1896 ntBASIC10.46□□□□□ -0.73
CSMD3Q7Z407 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 FKBP4P6-201ENST00000457486 1332 ntBASIC10.46□□□□□ -0.73
CSMD3Q7Z407 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 BRI3P1-201ENST00000440440 378 ntBASIC10.46□□□□□ -0.73
CSMD3Q7Z407 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 RBM8B-201ENST00000555532 525 ntBASIC10.46□□□□□ -0.73
CSMD3Q7Z407 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 ETV2-207ENST00000619399 994 ntTSL 5 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC10.46□□□□□ -0.73
CSMD3Q7Z407 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 AC024909.3-201ENST00000611513 2257 ntBASIC10.46□□□□□ -0.74
CSMD3Q7Z407 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.46□□□□□ -0.74
CSMD3Q7Z407 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms