Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.58■□□□□ 0.08
RAPH1Q70E73 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 AC013726.1-201ENST00000563747 2285 ntBASIC15.57■□□□□ 0.08
RAPH1Q70E73 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 FO393414.2-201ENST00000405153 598 ntBASIC15.57■□□□□ 0.08
RAPH1Q70E73 FAM58DP-201ENST00000428076 619 ntBASIC15.57■□□□□ 0.08
RAPH1Q70E73 RBPMS2P1-201ENST00000437762 623 ntBASIC15.57■□□□□ 0.08
RAPH1Q70E73 MTND6P24-201ENST00000440466 518 ntBASIC15.57■□□□□ 0.08
RAPH1Q70E73 DNAJB3-201ENST00000446806 729 ntBASIC15.57■□□□□ 0.08
RAPH1Q70E73 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
RAPH1Q70E73 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 CICP14-201ENST00000629111 2732 ntBASIC15.57■□□□□ 0.08
RAPH1Q70E73 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAPH1Q70E73 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 AC232323.1-201ENST00000540724 2099 ntBASIC15.56■□□□□ 0.08
RAPH1Q70E73 REXO1L5P-201ENST00000622260 2098 ntBASIC15.56■□□□□ 0.08
RAPH1Q70E73 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
RAPH1Q70E73 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAPH1Q70E73 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms