Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDZRN4Q6ZMN7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PDZRN4Q6ZMN7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDZRN4Q6ZMN7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.87■□□□□ 0.45
PDZRN4Q6ZMN7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDZRN4Q6ZMN7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PDZRN4Q6ZMN7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.87■□□□□ 0.45
PDZRN4Q6ZMN7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.87■□□□□ 0.45
PDZRN4Q6ZMN7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.87■□□□□ 0.45
PDZRN4Q6ZMN7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.87■□□□□ 0.45
PDZRN4Q6ZMN7 AC067750.1-201ENST00000608826 6545 ntBASIC17.87■□□□□ 0.45
PDZRN4Q6ZMN7 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 PCGF3-213ENST00000620529 1899 ntBASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 AL928921.2-201ENST00000641325 2442 ntBASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 FAM8A3P-201ENST00000427218 844 ntBASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 AC069262.1-201ENST00000539058 672 ntBASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 SPCS2P1-201ENST00000561636 679 ntBASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 AC021097.1-201ENST00000607902 574 ntBASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 TCAF1P1-201ENST00000414990 2232 ntBASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 CR383656.2-201ENST00000548656 2254 ntBASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PDZRN4Q6ZMN7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 AC092127.1-201ENST00000567093 3455 ntBASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 COL6A4P2-202ENST00000504443 2753 ntBASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 AC105250.1-201ENST00000509378 2057 ntBASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 AC092364.2-202ENST00000597012 1073 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms