Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 ECM1P1-201ENST00000604092 1279 ntBASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 AL606495.2-201ENST00000605867 535 ntBASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 MIR1247-201ENST00000408206 136 ntBASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC62Q6P9F0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC62Q6P9F0 KRT8P14-201ENST00000414254 1442 ntBASIC17.27■□□□□ 0.35
CCDC62Q6P9F0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC62Q6P9F0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
CCDC62Q6P9F0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 GPAA1P2-201ENST00000417923 928 ntBASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 Z93015.1-201ENST00000451718 390 ntBASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 AC099548.2-209ENST00000480264 625 ntBASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC62Q6P9F0 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms